Results for job id S13470

Job information:
Job id: S13470
Job name: Dom 2 + LIg
Job starting time: 2024-05-23 10:35:05
Job ending time: 2024-05-23 11:09:27
Peptide sequence: RVPDLLV
Protein receptor structure: rec_clean.pdb


Top 10 predicted binding modes
Predicted models are ranked by a knowledge-based scoring function, ITScorePeP.
Click the "View" button on the right panel to display the corresponding binding mode.
Models Active View ITScorePeP Download
Model 1

-81.0 Download
Model 2

-76.8 Download
Model 3

-76.8 Download
Model 4

-73.6 Download
Model 5

-72.4 Download
Model 6

-72.0 Download
Model 7

-71.2 Download
Model 8

-69.2 Download
Model 9

-68.9 Download
Model 10

-68.4 Download

Download
Click HERE to download all the results.

Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top10_pep_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".