Results for job id S13577

Job information:
Job id: S13577
Job name: MrkD (4) DRB0101
Job starting time: 2024-06-23 14:38:28
Job ending time: 2024-06-23 18:12:51
Peptide sequence: ETRYITIPLHARFYQ
Protein receptor structure: rec_clean.pdb


Top 10 predicted binding modes
Predicted models are ranked by a knowledge-based scoring function, ITScorePeP.
Click the "View" button on the right panel to display the corresponding binding mode.
Models Active View ITScorePeP Download
Model 1

-259.0 Download
Model 2

-243.2 Download
Model 3

-242.6 Download
Model 4

-240.4 Download
Model 5

-235.8 Download
Model 6

-235.6 Download
Model 7

-233.9 Download
Model 8

-233.1 Download
Model 9

-232.5 Download
Model 10

-229.0 Download

Download
Click HERE to download all the results.

Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top10_pep_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".