Results for job id S13855

Job information:
Job id: S13855
Job name: I1L_2
Job starting time: 2024-08-19 13:25:29
Job ending time: 2024-08-19 17:54:37
Peptide sequence: YGRKKRRQRRR
Protein receptor structure: rec_clean.pdb


Top 10 predicted binding modes
Predicted models are ranked by a knowledge-based scoring function, ITScorePeP.
Click the "View" button on the right panel to display the corresponding binding mode.
Models Active View ITScorePeP Download
Model 1

-190.6 Download
Model 2

-188.0 Download
Model 3

-185.9 Download
Model 4

-181.0 Download
Model 5

-181.0 Download
Model 6

-180.7 Download
Model 7

-179.7 Download
Model 8

-178.3 Download
Model 9

-177.6 Download
Model 10

-177.1 Download

Download
Click HERE to download all the results.

Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top10_pep_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".