Results for job id S13900

Job information:
Job id: S13900
Job name: fang1
Job starting time: 2024-08-29 07:19:19
Job ending time: 2024-08-29 08:01:22
Peptide sequence: YFRPDDDC
Protein receptor structure: rec_clean.pdb


Top 10 predicted binding modes
Predicted models are ranked by a knowledge-based scoring function, ITScorePeP.
Click the "View" button on the right panel to display the corresponding binding mode.
Models Active View ITScorePeP Download
Model 1

-149.7 Download
Model 2

-135.5 Download
Model 3

-133.3 Download
Model 4

-131.1 Download
Model 5

-130.3 Download
Model 6

-130.0 Download
Model 7

-128.7 Download
Model 8

-127.1 Download
Model 9

-126.3 Download
Model 10

-124.9 Download

Download
Click HERE to download all the results.

Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top10_pep_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".