Results for job id S12409
Job information:
Job id: S12409
Job name: apol1 tcell 2
Job starting time: 2023-11-03 02:38:32
Job ending time: 2023-11-03 03:32:16
Peptide sequence: SLAGNTYQL
Protein receptor structure: rec_clean.pdb
Top 10 predicted binding modes
Predicted models are ranked by a knowledge-based scoring function, ITScorePeP.
Click the "View" button on the right panel to display the corresponding binding mode.
|
|
||||
| Models | Active | View | ITScorePeP | Download |
| Model 1 | -124.4 | Download | ||
| Model 2 | -121.6 | Download | ||
| Model 3 | -121.6 | Download | ||
| Model 4 | -120.9 | Download | ||
| Model 5 | -116.7 | Download | ||
| Model 6 | -116.0 | Download | ||
| Model 7 | -114.8 | Download | ||
| Model 8 | -114.1 | Download | ||
| Model 9 | -113.1 | Download | ||
| Model 10 | -113.0 | Download |
Download
Click HERE to download all the results.
Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top10_pep_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".