Results for job id S13178

Job information:
Job id: S13178
Job name: redo_3D
Job starting time: 2024-04-11 12:40:00
Job ending time: 2024-04-11 12:59:28
Peptide sequence: NEYYV
Protein receptor structure: rec_clean.pdb


Top 10 predicted binding modes
Predicted models are ranked by a knowledge-based scoring function, ITScorePeP.
Click the "View" button on the right panel to display the corresponding binding mode.
Models Active View ITScorePeP Download
Model 1

-108.0 Download
Model 2

-103.5 Download
Model 3

-98.6 Download
Model 4

-97.7 Download
Model 5

-97.3 Download
Model 6

-96.7 Download
Model 7

-94.9 Download
Model 8

-94.6 Download
Model 9

-93.9 Download
Model 10

-92.7 Download

Download
Click HERE to download all the results.

Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top10_pep_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".