Results for job id S13179
Job information:
Job id: S13179
Job name: redo_3D_box
Job starting time: 2024-04-11 12:41:33
Job ending time: 2024-04-11 13:00:21
Peptide sequence: NEYYV
Protein receptor structure: rec_clean.pdb
Top 10 predicted binding modes
Predicted models are ranked by a knowledge-based scoring function, ITScorePeP.
Click the "View" button on the right panel to display the corresponding binding mode.
|
|
||||
| Models | Active | View | ITScorePeP | Download |
| Model 1 | -109.1 | Download | ||
| Model 2 | -99.3 | Download | ||
| Model 3 | -98.3 | Download | ||
| Model 4 | -97.0 | Download | ||
| Model 5 | -96.4 | Download | ||
| Model 6 | -95.8 | Download | ||
| Model 7 | -95.8 | Download | ||
| Model 8 | -94.4 | Download | ||
| Model 9 | -94.0 | Download | ||
| Model 10 | -93.1 | Download |
Download
Click HERE to download all the results.
Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top10_pep_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".