Results for job id J01008
Job information:
Job id: J01008
Job name: TNFalpha_4
Job starting time: 2024-01-08/19:47:31
Job ending time: 2024-01-09/12:46:36
Peptide sequence: FTTTITITGSFTNTSTVTSSTTTGFKFTSCPGGAG
Protein receptor structure: rec_clean.pdb
Top 10 predicted binding modes
Click the "View" button on the right panel to display the corresponding binding mode.
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Models | Active | View | PepProScore | Download |
Model 1 | -7.06 | Download | ||
Model 2 | -6.5 | Download | ||
Model 3 | -6.3 | Download | ||
Model 4 | -6.27 | Download | ||
Model 5 | -6.23 | Download | ||
Model 6 | -6.21 | Download | ||
Model 7 | -6.1 | Download | ||
Model 8 | -6.09 | Download | ||
Model 9 | -6.05 | Download | ||
Model 10 | -6.05 | Download |
Download
Click Here to download all the results.
Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top1k_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".