Results for job id J02113
Job information:
Job id: J02113
Job name: 3u
Job starting time: 2024-07-01/21:36:32
Job ending time: 2024-07-02/00:55:29
Peptide sequence: RRRKRKREWDDDDDPPKKRRRLD
Protein receptor structure: rec_clean.pdb
Top 10 predicted binding modes
Click the "View" button on the right panel to display the corresponding binding mode.
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| Models | Active | View | PepProScore | Download |
| Model 1 | -6.55 | Download | ||
| Model 2 | -6.48 | Download | ||
| Model 3 | -6.42 | Download | ||
| Model 4 | -6.4 | Download | ||
| Model 5 | -6.39 | Download | ||
| Model 6 | -6.26 | Download | ||
| Model 7 | -6.23 | Download | ||
| Model 8 | -6.21 | Download | ||
| Model 9 | -6.21 | Download | ||
| Model 10 | -6.2 | Download |
Download
Click Here to download all the results.
Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top1k_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".