Results for job id J02114
Job information:
Job id: J02114
Job name: 3u
Job starting time: 2024-07-01/21:36:57
Job ending time: 2024-07-01/22:32:36
Peptide sequence: NVIVLMLP
Protein receptor structure: rec_clean.pdb
Top 10 predicted binding modes
Click the "View" button on the right panel to display the corresponding binding mode.
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| Models | Active | View | PepProScore | Download |
| Model 1 | -10.42 | Download | ||
| Model 2 | -10.4 | Download | ||
| Model 3 | -10.33 | Download | ||
| Model 4 | -10.3 | Download | ||
| Model 5 | -10.21 | Download | ||
| Model 6 | -10.04 | Download | ||
| Model 7 | -9.96 | Download | ||
| Model 8 | -9.92 | Download | ||
| Model 9 | -9.87 | Download | ||
| Model 10 | -9.8 | Download |
Download
Click Here to download all the results.
Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top1k_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".