Results for job id J02437
Job information:
Job id: J02437
Job name: ak_04
Job starting time: 2024-10-14/05:53:03
Job ending time: 2024-10-14/10:48:34
Peptide sequence: APPGAKRRPRVADDA
Protein receptor structure: rec_clean.pdb
Top 10 predicted binding modes
Click the "View" button on the right panel to display the corresponding binding mode.
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| Models | Active | View | PepProScore | Download |
| Model 1 | -8.67 | Download | ||
| Model 2 | -8.39 | Download | ||
| Model 3 | -8.22 | Download | ||
| Model 4 | -8.13 | Download | ||
| Model 5 | -7.98 | Download | ||
| Model 6 | -7.96 | Download | ||
| Model 7 | -7.92 | Download | ||
| Model 8 | -7.91 | Download | ||
| Model 9 | -7.88 | Download | ||
| Model 10 | -7.87 | Download |
Download
Click Here to download all the results.
Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top1k_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".