Results for job id J02627
Job information:
Job id: J02627
Job name: test
Job starting time: 2024-12-02/21:10:29
Job ending time: 2024-12-02/21:22:16
Peptide sequence: HAGPIA
Protein receptor structure: rec_clean.pdb
Top 10 predicted binding modes
Click the "View" button on the right panel to display the corresponding binding mode.
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| Models | Active | View | PepProScore | Download |
| Model 1 | -9.96 | Download | ||
| Model 2 | -9.5 | Download | ||
| Model 3 | -9.2 | Download | ||
| Model 4 | -9.13 | Download | ||
| Model 5 | -9.01 | Download | ||
| Model 6 | -8.86 | Download | ||
| Model 7 | -8.86 | Download | ||
| Model 8 | -8.66 | Download | ||
| Model 9 | -8.55 | Download | ||
| Model 10 | -8.49 | Download |
Download
Click Here to download all the results.
Note: Use ViewDock option in Chimera to display and analyze results on your local machine:
1) Open Chimera and click "Menu: File ... open" to open the receptor pdb file ("rec_clean.pdb");
2) Click "Menu: Tools ... Surface/Binding Analysis ... ViewDock" to open ViewDock and load the predicted peptide binding modes (e.g. "Top1k_models.pdb"). Once the file is successfully loaded, the program will ask for the file type. Choose "Dock 4, 5 or 6".